PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN19399.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 282aa    MW: 31525.9 Da    PI: 9.7569
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN19399.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.81.9e-08163203954
                 HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  r RR+ri +++  L++l+P       +K++ a++L +A++Y+k L
  KHN19399.1 163 ARHRRERISERIRILQRLVPGG-----TKMDTASMLDEAIHYVKFL 203
                 699*****************87.....8****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.434154203IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.3E-14155213IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.09E-14158213IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003537.0E-14160209IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000108.7E-6164203IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.79E-6177208No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0016787Molecular Functionhydrolase activity
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    Send to blast
MDVDIVKTSN NNNNMDVMAM MMQMEKFPEL LFCDDPFYTT TPTYQETDLL SSGRSSSSTT  60
SASTLFNNNV TTTIPPTTTP SNNVVQFSNI DDLFQQQPPM SQSLQLQPYP SEKKKKNNNS  120
MAAMREMIFR IAVMQPVHID PESIKPPKRR NVKISKDPQS VAARHRRERI SERIRILQRL  180
VPGGTKMDTA SMLDEAIHYV KFLKKQVQTL EQAGANRSPH SSNNNNNILN TTHVVGAVGF  240
PLGMSSNYSN NIISNVVNYS LLMKGGCQPC QVFGSTSKQL LS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0974490.0BT097449.1 Soybean clone JCVI-FLGm-16M5 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006600968.10.0PREDICTED: transcription factor HEC2-like
SwissprotQ9FHA71e-48HEC1_ARATH; Transcription factor HEC1
TrEMBLA0A0B2QGQ40.0A0A0B2QGQ4_GLYSO; Transcription factor HEC2
TrEMBLI1MVX10.0I1MVX1_SOYBN; Uncharacterized protein
STRINGGLYMA17G19830.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF65134141
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67060.18e-43bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]